On aircraft that carry their IR missiles on external stores, like the F/A-18, an IR-missile acquires a lock by having its seeker being directed to the target heat source by whatever means and the missile then locking on the the heat contrast with its own seeker. The missile only gets fired once the seeker has a positive lock.
How would this work in an aircraft that carries its IR-missiles internally?
Would the weapons bay doors have to be open to let the missile acquire a target with its own seeker or would the missile just be given an approximate position where to search and it would then acquire a lock on its own once it's out of the weapons bay?