The logical answer is that there were aircraft that required both low octane fuel and high octane fuel on board. You don't want to use high octane fuel in a low octane engine (unless you're forced to; the low octane engine can't scavenge the excess lead in the high octane fuel and it fouls plugs among other things) and vice versa (the high octane engine blows up from detonation if using low octane fuel). Either there were Japanese patrol or utility aircraft on board used a lower octane fuel than the fighters and torpedo bombers, or the ships had gasoline powered engines aboard used for other things like standby power and required a separate lower octane fuel supply.